ChemicalBook >> CAS DataBase List >>2'-Deoxycytidine

2'-Deoxycytidine

CAS No.
951-77-9
Chemical Name:
2'-Deoxycytidine
Synonyms
DC;deoxycytidine;4-AMino-1-((2R,4S,5R)-4-hydroxy-5-(hydroxyMethyl)tetrahydrofuran-2-yl)pyriMidin-2(1H)-one;dCyd;2-Deoxycystidine;Cytosine deoxyribonucleoside;4-amino-1-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-pyrimidin-2-one;2'-DC;2'Isomer Only)
CBNumber:
CB7452978
Molecular Formula:
C9H13N3O4
Molecular Weight:
227.22
MDL Number:
MFCD00006547
MOL File:
951-77-9.mol
MSDS File:
SDS
Last updated:2024-04-26 14:09:12

2'-Deoxycytidine Properties

Melting point 209-211 °C(lit.)
Boiling point 368.93°C (rough estimate)
Density 1.3171 (rough estimate)
refractive index 59 ° (C=1, H2O)
storage temp. -20°C
solubility H2O: 50 mg/mL, clear, colorless
form Crystalline Powder
pka 14.03±0.60(Predicted)
color White
Water Solubility Soluble in water, DMSO.
BRN 87567
InChI InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1
InChIKey CKTSBUTUHBMZGZ-SHYZEUOFSA-N
SMILES OC[C@H]1O[C@@H](N2C=CC(N)=NC2=O)C[C@@H]1O
CAS DataBase Reference 951-77-9(CAS DataBase Reference)
EWG's Food Scores 1
NCI Dictionary of Cancer Terms deoxycytidine
FDA UNII 0W860991D6
NIST Chemistry Reference Deoxycytidine(951-77-9)
EPA Substance Registry System Cytidine, 2'-deoxy- (951-77-9)

SAFETY

Risk and Safety Statements

Symbol(GHS)  GHS hazard pictograms
GHS07
Signal word  Warning
Hazard statements  H315-H319-H335
Precautionary statements  P280-P302+P352-P304+P340
Safety Statements  24/25
WGK Germany  3
RTECS  HA3800000
10
TSCA  Yes
HS Code  29349990
NFPA 704
0
1 0

2'-Deoxycytidine price More Price(41)

Manufacturer Product number Product description CAS number Packaging Price Updated Buy
Sigma-Aldrich D3897 2′-Deoxycytidine ≥99% (HPLC) 951-77-9 1g $140 2024-03-01 Buy
Sigma-Aldrich D3897 2′-Deoxycytidine ≥99% (HPLC) 951-77-9 5g $482 2024-03-01 Buy
TCI Chemical D3583 2'-Deoxycytidine >98.0%(HPLC)(T) 951-77-9 1g $33 2024-03-01 Buy
TCI Chemical D3583 2'-Deoxycytidine >98.0%(HPLC)(T) 951-77-9 5g $99 2024-03-01 Buy
Alfa Aesar J63062 2'-Deoxycytidine 951-77-9 1g $28.65 2024-03-01 Buy
Product number Packaging Price Buy
D3897 1g $140 Buy
D3897 5g $482 Buy
D3583 1g $33 Buy
D3583 5g $99 Buy
J63062 1g $28.65 Buy

2'-Deoxycytidine Chemical Properties,Uses,Production

Description

2'-Deoxycytidine is a deoxyribonucleotide that is used in the synthesis of DNA. 2'-Deoxycytidine has been shown to inhibit the kinase activity of IL-2 receptor and Toll-like receptor, which are proteins that regulate the immune response. 2'-Deoxycytidine also inhibits DNA polymerase activity and thermal expansion, which may make it a good candidate as an anticancer drug.

Chemical Properties

White crystalline powder

Uses

A deoxyribonucleoside

Uses

2?-Deoxycytidine (deoxyC) is one of the deoxynucleosides which after phosphorylation to dCTP is used to synthesis DNA via various DNA polymerases or reverse transcriptases. 2?-Deoxycytidine (deoxyC) is the substrate for deoxycytidine deaminase (EC 3.5.4.14) which converts it into 2?-deoxyuridine. 2?-Deoxycytidine is phosphorylated to the nucleotide dCMP by the enzyme deoxycytidine kinase (DCK).

Definition

ChEBI: A pyrimidine 2'-deoxyribonucleoside having cytosine as the nucleobase.

General Description

2′-Deoxycytidine (deoxyC) is one of the deoxynucleosides containing cytosine as the nucleobase. It is found in the blood, feces, and urine.

Biological Activity

2-deoxycytidine is a cytidine analog [1].2-deoxycytidine prevents dna methylation by incorporating itself into newly synthesizing dna strand. 2-deoxycytidine also binds to dna methyltransferase irreversibly and hinders its activity. thus, 2-deoxycytidine was approved as the most efective demethylating agent for the treatment of cancer [1].2-deoxycytidine at clinically achievable and nontoxic concentrations (≥ 100 μmol/l) protected normal bone marrow progenitor cells against the inhibitory effects of co-administered, high concentrations of 3’-azido-3’-deoxythymidine (azt) (≥ 10 μmol/l). in normal bone marrow mononuclear cells (bmmc), 2-deoxycytidine also significantly corrected azt-mediated depletion of intracellular thymidine triphosphate and 2-deoxycytidine triphosphate levels. furthermore, 2-deoxycytidine reduced the intracellular accumulation of azt triphosphate and its dna incorporation in bmmc [2].in a rat model of myocardial infarction induced by ligating left anterior descending coronary artery, human umbilical cord mesenchymal stem cells treated with 2-deoxycytidine (5, 10, 20 and 40 μm) before transplantation to the left ventricular wall immediately after ligation significantly improved the cardiac systolic and diastolic functions, and pumping ability. fibrotic area and left ventricular wall thickness were also significantly improved [1].[1]. ali s r, ahmad w, naeem n, et al. small molecule 2'-deoxycytidine differentiates human umbilical cord-derived mscs into cardiac progenitors in vitro and their in vivo xeno-transplantation improves cardiac function. molecular and cellular biochemistry, 2020, 470(1-2): 99-113.[2]. bhalla k, birkhofer m, li g r, et al. 2'-deoxycytidine protects normal human bone marrow progenitor cells in vitro against the cytotoxicity of 3'-azido-3'-deoxythymidine with preservation of antiretroviral activity. blood, 1989, 74(6): 1923-1928.

Biochem/physiol Actions

2′-Deoxycytidine (deoxyC) forms dCTP upon phosphorylation which is used to synthesis DNA via various DNA polymerases or reverse transcriptases. DeoxyC is the substrate for deoxycytidine deaminase (EC 3.5.4.14) which converts it into 2′-deoxyuridine. DeoxyC is phosphorylated to the nucleotide dCMP by the enzyme deoxycytidine kinase (DCK). DeoxyC serves as a potential head and neck cancer marker.

Safety Profile

Experimental reproductive effects. Mutation data reported. When heated to decomposition it emits toxic fumes of NOx.

Purification Methods

Purify 2'-deoxycytidine by recrystallisation from MeOH/Et2O or EtOH and dry it in air. [NMR: Miles J Am Chem Soc 85 1007 1963, UV: Fox & Shugar Biochim Biophys Acta 9 369 1952.] The hydrochloride crystallises from H2O/EtOH and has m 174o(dec, 169-173o). [Walker & Butler Can J Chem 34 1168 1956.] The picrate has m 208o(dec). [Fox et al. J Am Chem Soc 83 4066 1961, Beilstein 25 III/IV 3662.]

Structure and conformation

2'-Deoxycytidine monohydrate (dCMP) is a nucleoside phosphate in being comprised of a deoxyribonucleoside and one phosphate group. It has a deoxyribose as its sugar constituent with one phosphate group attached. Its nucleoside contains a pyrimidine base, i.e., a cytosine attached to the deoxyribose sugar. It has only one phosphate group attached to the nucleoside. Its conjugate acid form is deoxycytidylic acid, whereas its conjugate base form is deoxycytidylate. dCMP, instead of having a hydroxyl group on the 2′ carbon of the sugar component as it is in Cytidine monophosphate (CMP), has it reduced to a hydrogen atom (thus, deoxy- in its name). dCMP is one of the monomeric units that constitute DNA, whereas CMP is one of the monomeric units that make up RNA.

380887-00-3
7664-41-7
951-77-9
Synthesis of 2'-Deoxycytidine from Acetamide, N-[1-(2-deoxy-β-L-erythro-pentofuranosyl)-1,2-dihydro-2-oxo-4-pyrimidinyl]- and Ammonia
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View Lastest Price from 2'-Deoxycytidine manufacturers

Image Update time Product Price Min. Order Purity Supply Ability Manufacturer
2'-Deoxycytidine pictures 2024-04-26 2'-Deoxycytidine
951-77-9
US $10.00 / kg 1kg 99.8% 10000ton Ouhuang Engineering Materials (Hubei) Co., Ltd
2'-Deoxycytidine monohydrate pictures 2024-04-24 2'-Deoxycytidine monohydrate
951-77-9
US $1.00 / KG 1KG 99.91% 200000 Ouhuang Engineering Materials (Hubei) Co., Ltd
2'-Deoxycytidine monohydrate pictures 2023-06-30 2'-Deoxycytidine monohydrate
951-77-9
US $0.00 / KG 1KG 99% 50000KG/month Hebei Mojin Biotechnology Co., Ltd
  • 2'-Deoxycytidine pictures
  • 2'-Deoxycytidine
    951-77-9
  • US $10.00 / kg
  • 99.8%
  • Ouhuang Engineering Materials (Hubei) Co., Ltd
2''-DEOXYCYTIDINE (CYTOSINE): (DEOXYRIBOSIDE) 2-DEOXYCYTIDINE extrapure 2'-Deoxycytidine ,98% 2'-Deoxycytidine(dC) 1-(2-Deoxy-β-D-ribofuranosyl)cytosine 4-AMino-1-(2-deoxy-β-D-erythro -pentofuranosyl)-2(1H)-pyriMidinone 2(1H)-Pyrimidinone, 4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)- 2'-DEOXYCYTIDINE FREE BASE 2''-Deoxycytidine (and/or unspecified salts) 2'-Deoxycytidine monohydrate 1-(2-Deoxy-beta-D-ribofuranosyl)cytosine dC (2R,3R,4S,5R)-2-(4-aMino-1,2-dihydropyriMidin-1-yl)-5-(hydroxyMethyl)oxolane-3,4-diol 2’-deoxy-cytidin Cytidine, 2'-deoxy- Cytosine, 1-(2-deoxy-beta-D-erythro-pentofuranosyl)- cytosine,deoxyribonucleoside Deoxyribose cytidine deoxyribosecytidine Desoxycytidine 2'-DEOXY-D-CYTIDINE 2'-DC CYTOSINE DEOXYRIBOSIDE 1-(2'-DEOXY-BETA-D-RIBOFURANOSYL)CYTOSINE 2&apos 4-amino-1-(4-hydroxy-5-methylol-tetrahydrofuran-2-yl)pyrimidin-2-one 4-amino-1-[(2R,4S,5R)-4-hydroxy-5- 4-amino-1-[4-hydroxy-5-(hydroxymethyl)-2-tetrahydrofuranyl]-2-pyrimidinone 4-amino-1-[4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2(1H)-one 4-amino-1-[4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2-one Deoxycytidine-2-14C 3,N4-Etheno-2&rsquo 5,6-Dihydro-5-aza-2&rsquo N4-[(Dimethylamino)methylidene]-5-[3-oxo-[[6-[(trifluoroacetyl)amino]hexyl]amino]-1-propenyl]-2&rsquo -deoxy-6-oxo Cytidine -deoxyuridine (&beta Isomer Only) 5-Aza-2&rsquo N4-Benzoyl-5-(furan-2-yl)-2&rsquo -Deoxycytidine monohydrate Cytarabine Impurity 20(2'-Deoxycytidine) N4-Ethyl-2&rsquo 5-[(2-Cyanoethoxy)methyl]-2&rsquo 2-Thio-2&rsquo 5-Chloro-2&rsquo 4-Amino-1-(2-deoxy-B-D-erythropentofuranosyl)-1,3,5-triazin-2(1H)-one) Decitabine, DNA Methyltransferase Inhibitor|(5-Aza-2&rsquo -Deoxy-5-azacytidine 5-Carboethoxy-2&rsquo Deoxycytidine Deoxycytidine 2'-Deoxycytidine> 2'-Deoxycytidine monohydrate USP/EP/BP 951-77-9 USP/EP/BP 4-Amino-1-((2S,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidin-2(1H)-one 2-Deoxycystidine 4-amino-1-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-pyrimidin-2-one 4-AMino-1-((2R,4S,5R)-4-hydroxy-5-(hydroxyMethyl)tetrahydrofuran-2-yl)pyriMidin-2(1H)-one Cytosine deoxyribonucleoside dCyd