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2382994-65-0

2382994-65-0 Structure

2382994-65-0 Structure
IdentificationBack Directory
[Name]

Sulfo-Cyanine5.5 azide
[CAS]

2382994-65-0
[Synonyms]

Sulfo-Cyanine5.5 azide
[Molecular Formula]

C43H49KN6O13S4
[MOL File]

2382994-65-0.mol
[Molecular Weight]

1025.23
Chemical PropertiesBack Directory
[solubility ]

可溶于甲醇,DMF等有机溶剂,极易溶于水
[Appearance]

Dark blue solid
[ex/em]

678/706 nm (PBS buffer)
[ε(extinction coefficient)]

211000 L⋅mol−1⋅cm−1
[Φ(quantum yield)]

0.21
Hazard InformationBack Directory
[Description]

sulfo-Cyanine5.5 is a water-soluble, hydrophilic fluorophore with emission in the far-red area of the spectrum, an analog of Cy5.5®. Like other cyanine dyes, sulfo-Cyanine5.5 has an outstanding molar extinction coefficient, giving rise to its bright fluorescence. The molecule contains four sulfo groups that provide hydrophilicity and negative charge to the fluorophore — this minimizes non-specific binding.


The azide group of Sulfo-Cyanine5.5 azide can be conjugated with terminal alkynes in the presence of copper(I) catalyst or with cycloalkynes in copper-free strain-promoted reaction.


The reagent possesses high hydrophilicity and is recommended for labeling biomolecules in an aqueous environment.

[Chemical Properties]

Appearance: Dark blue solid
ex/em: 678/706 nm (PBS buffer)
Extinction coefficient (ε): 211000 L??mol??1??cm??1
Quantum yield (Φ): 0.21
[Uses]

Sulfo-Cyanine5.5 azide tripotassium, a near-infrared (NIR) fluorescent dye, is an azide-functionalized Sulfo-Cyanine5.5 (Ex=678 nm, Em=694 nm). Sulfo-Cyanine5.5 azide tripotassium can react with alkynes for Click Chemistry labeling[1]. It contains an azide group and can undergo copper-catalyzed azide-alkyne cycloaddition (CuAAc) with molecules containing alkyne groups. It can also undergo ring strain-promoted alkyne-azide cycloaddition (SPAAC) with molecules containing DBCO or BCN groups.
[References]

[1] Katrin Spinnler, et al. An Alkyne-functionalized Arginine for Solid-Phase Synthesis Enabling "Bioorthogonal" Peptide Conjugation. ACS Med Chem Lett. 2019 Sep 30;11(3):334-339. DOI:10.1021/acsmedchemlett.9b00388
[Abs/Em Maxima]

673/691 nm
[Fluoresene quantum yield]

0.21
[Extinction Coefficient]

211000
[CF260]

0.09
[CF280]

0.11
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