ChemicalBook--->CAS DataBase List--->115899-38-2

115899-38-2

115899-38-2 Structure

115899-38-2 Structure
IdentificationBack Directory
[Name]

TFA-ap-dC
[CAS]

115899-38-2
[Synonyms]

TFA-ap-dC
5-TFA-ap-dC
5-TFA-ap-2-Deoxycytidine
2'-Deoxy-5-[3-[(trifluoroacetyl)amino]-1-propynyl]cytidine
2'-Deoxy-5-[3-[(trifluoroacetyl)amino]-1-propyn-1-yl]-cytidine
Cytidine, 2'-deoxy-5-[3-[(trifluoroacetyl)amino]-1-propynyl]...
Cytidine, 2'-deoxy-5-[3-[(trifluoroacetyl)amino]-1-propyn-1-yl]-
N-(3-(4-amino-1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-5-yl)prop-2-yn-1-yl)-2,2,2-trifluoroacetamide
[EINECS(EC#)]

2017-001-1
[Molecular Formula]

C14H15F3N4O5
[MDL Number]

MFCD28134647
[MOL File]

115899-38-2.mol
[Molecular Weight]

376.29
Chemical PropertiesBack Directory
[density ]

1.65±0.1 g/cm3(Predicted)
[storage temp. ]

under inert gas (nitrogen or Argon) at 2–8 °C
[pka]

9.24±0.46(Predicted)
[Appearance]

White to yellow Solid
Spectrum DetailBack Directory
[Spectrum Detail]

TFA-ap-dC(115899-38-2)1HNMR
Hazard InformationBack Directory
[Synthesis]

AcetaMide, 2,2,2-trifluoro-N-2-propynyl-

14719-21-2

5-Iodo-2'-deoxycytidine

611-53-0

TFA-ap-dC

115899-38-2

Under argon protection, 5-iodo-2'-deoxycytidine (10 g, 28.32 mmol) was dissolved in DMF (200 mL) in a light protected round bottom flask. CuI (1.08 g, 5.67 mmol), triethylamine (7.80 mL, 55.60 mmol), 2,2,2-trifluoro-N-(prop-2-yn-1-yl)acetamide (12.8 g, 84.76 mmol), and Pd(PPh3)4 (3.27 g, 2.83 mmol) were added sequentially. The reaction mixture was stirred at room temperature for 18 hours. Subsequently, sodium bicarbonate (20 mg) was added and stirring was continued for 1 hour. After completion of the reaction, the crude product was obtained by filtration under reduced pressure and concentration to remove the volatile solvent. Purification by silica gel fast column chromatography (elution gradient: CH2Cl2, CH2Cl2:EtOAc 1:1, EtOAc:MeOH 9:1) afforded the target compound N-(3-(4-amino-1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuryl-2- yl)-2-oxo-1,2-dihydropyrimidin-5-yl)propane- 2-yn-1-yl)-2,2,2-trifluoroacetamide (7) as a beige solid in quantitative yield.1H NMR (D2O) δ 2.24-2.17 (m, 1H, H-2'), 2.41-2.37 (m, 1H, H-2'), 3.68 (dd, J = 12.5, 5.0 Hz, 1H, H-5'), 3.77 (dd, J = 12.5, 3.2 Hz, 1H, H-5'), 3.99 (m, 1H, H-4'), 4.27 (s, 2H, CH2N), 4.34 (m, 1H, H-3'), 6.11 (t, J = 6.3 Hz, 1H, H-1'), 8.1 (br s, 1H, NH); MS (ES): m/z (%) (M-H) 375 (100).

[References]

[1] Patent: EP2607369, 2015, B1. Location in patent: Paragraph 0138
[2] Chemical Communications, 2005, # 36, p. 4551 - 4553
[3] Patent: WO2016/182984, 2016, A1. Location in patent: Paragraph 00140
[4] Journal of the American Chemical Society, 2005, vol. 127, # 43, p. 15071 - 15082
[5] Patent: CN104693258, 2017, B. Location in patent: Paragraph 0088; 0094; 0095
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