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2170679-45-3

2170679-45-3 Structure

2170679-45-3 Structure
IdentificationBack Directory
[Name]

dBRD9
[CAS]

2170679-45-3
[Synonyms]

dBRD9
[Molecular Formula]

C40H45N7O10
[MDL Number]

MFCD31812543
[MOL File]

2170679-45-3.mol
[Molecular Weight]

783.84
Chemical PropertiesBack Directory
[Boiling point ]

1014.2±65.0 °C(Predicted)
[density ]

1.357±0.06 g/cm3(Predicted)
[form ]

Solid
[pka]

10.74±0.40(Predicted)
[color ]

Light yellow to yellow
[InChIKey]

AIOCFZJGGGEWDK-UHFFFAOYSA-N
[SMILES]

O=C1N(C2CCC(=O)NC2=O)C(=O)C2=CC=CC(NCCOCCOCCNC(=O)CN(C)CC3C(=CC(C4=CN(C)C(=O)C5=CN=CC=C45)=CC=3OC)OC)=C12
Hazard InformationBack Directory
[Description]

dBRD9 is a potent and selective Degrader (PROTAC?) of BRD9 (IC50 = 56.6 nM in MOLM-13 cells). dBRD9 is composed of the BRD9 inhibitor BI 7273 conjugated to the cereblon E3 ligase ligand pomalidomide. Does not degrade BRD4 or BRD7 at concentrations up to 5 μM. Displays antiproliferative effects in human AML cell lines.
[Uses]

dBRD9,a PROTAC, can selective degrades BRD9. dBRD9 improves the bromine domain binding profile and reduces the binding activity of the whole BET family[1].
[Biological Activity]

dBRD9 is a PEG-linked pomalidomide conjugate and was found to prompt rapid BRD9 degradation over a broad range of concentrations. Besides, also shows an improved bromodomain engagement profile, with reduced binding activity across the BET family. Meanwhile, dBRD9 (0.5, 5, 50, 500, 5000 nM; 4 h) decreases the expression of BRD9 protein in MOLM-13 cells in a dose-dependent manner. However, it shows no significant effect on the expression of BRD4 and BRD7 proteins. Moreover, dBRD9 (100 nM; 2 h) shows selectivity for BRD9 degradation with a 5.5 median fold lower abundance in dBRD9 treated samples in MOLM-13 cells. However, the levels of other proteins were remarkably static between treatments, with 99% of proteins differing less than 0.30 fold. In addition, dBRD9 (0-100; 7 days) shows a potent anti-proliferative effect in EOL-1 and MOML-13 cells in a dose-dependent manner. All in all, dBRD9 is a PROTAC and can selectively degrade BRD9.
[IC 50]

BRD9
[References]

[1] Remillard D, et al. Degradation of the BAF Complex Factor BRD9 by Heterobifunctional Ligands. Angew Chem Int Ed Engl. 2017 May 15;56(21):5738-5743. DOI:10.1002/anie.201611281
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