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5-CHLORO-2'-DEOXYURIDINE

CAS No.
50-90-8
Chemical Name:
5-CHLORO-2'-DEOXYURIDINE
Synonyms
CldU;CLUDR;NSC-371331, CDC;Chlorodeoxyuridine;5-Chlorodeoxyuridin;5-CHLORODEOXYURIDINE;5-CHLORODESOXYURIDINE;5-chloro-2’-deoxy-uridin;5-CHLORO-2'-DEOXYURIDINE;2'-DEOXY-5-CHLOROURIDINE
CBNumber:
CB0246956
Molecular Formula:
C9H11ClN2O5
Molecular Weight:
262.65
MDL Number:
MFCD00006531
MOL File:
50-90-8.mol
MSDS File:
SDS
TDS File:
TDS
Last updated:2026-04-21 10:31:43
Product description Number Pack Size Price
5-Chloro-2′-deoxyuridine thymidine analog C6891 100mg $111
5-Chloro-2''-deoxyuridine ≥98% 18155 25 mg $40
5-Chloro-2'-deoxyuridine ≥98% 18155 50mg $64
5-Chloro-2'-deoxyuridine ≥98% 18155 100mg $96
5-Chloro-2'-deoxyuridine ≥98% 18155 250mg $149
More product size

5-CHLORO-2'-DEOXYURIDINE Properties

Melting point 176-179°C
Density 1.5507 (rough estimate)
refractive index 1.6500 (estimate)
storage temp. -20°C
solubility DMSO (Slightly), Methanol (Slightly), Water (Slightly)
form Solid
pka 7.73±0.10(Predicted)
color White to Off-White
InChI InChI=1S/C9H11ClN2O5/c10-4-2-12(9(16)11-8(4)15)7-1-5(14)6(3-13)17-7/h2,5-7,13-14H,1,3H2,(H,11,15,16)/t5-,6+,7+/m0/s1
InChIKey NJCXGFKPQSFZIB-RRKCRQDMSA-N
SMILES OC[C@H]1O[C@@H](N2C=C(Cl)C(=O)NC2=O)C[C@@H]1O
CAS DataBase Reference 50-90-8(CAS DataBase Reference)
UNSPSC Code 41106305
NACRES NA.51

SAFETY

Risk and Safety Statements

Symbol(GHS)  GHS hazard pictogramsGHS hazard pictograms
GHS07,GHS08
Signal word  Warning
Hazard statements  H302+H312+H332-H351
Precautionary statements  P202-P280-P301+P312-P302+P352+P312-P304+P340+P312-P308+P313
PPE dust mask type N95 (US), Eyeshields, Gloves
Hazard Codes  Xn
Risk Statements  20/21/22-40
Safety Statements  36/37/39-45
WGK Germany  3
RTECS  YU7400000
HS Code  29349990
Storage Class 11 - Combustible Solids
Hazard Classifications Acute Tox. 4 Dermal
Acute Tox. 4 Inhalation
Acute Tox. 4 Oral
Carc. 2
NFPA 704
0
3 0

5-CHLORO-2'-DEOXYURIDINE price More Price(17)

Manufacturer Product number Product description CAS number Packaging Price Updated Buy
Sigma-Aldrich C6891 5-Chloro-2′-deoxyuridine thymidine analog 50-90-8 100mg $111 2026-03-19 Buy
Cayman Chemical 18155 5-Chloro-2''-deoxyuridine ≥98% 50-90-8 25 mg $40 2024-03-01 Buy
Cayman Chemical 18155 5-Chloro-2'-deoxyuridine ≥98% 50-90-8 50mg $64 2024-03-01 Buy
Cayman Chemical 18155 5-Chloro-2'-deoxyuridine ≥98% 50-90-8 100mg $96 2024-03-01 Buy
Cayman Chemical 18155 5-Chloro-2'-deoxyuridine ≥98% 50-90-8 250mg $149 2023-01-06 Buy
Product number Packaging Price Buy
C6891 100mg $111 Buy
18155 25 mg $40 Buy
18155 50mg $64 Buy
18155 100mg $96 Buy
18155 250mg $149 Buy

5-CHLORO-2'-DEOXYURIDINE Chemical Properties,Uses,Production

Description

5-Chloro-2''-deoxyuridine (CldU) is a thymidine analog that is readily incorporated, following phosphorylation, into newly synthesized DNA in place of thymidine. Like 5-bromo-2’-deoxyuridine and 5-iodo-2’-deoxyuridine, CldU can be detected immunologically in cells and tissues. CldU can also be added to cells or tissues sequentially with another thymidine analog to label temporally distinct populations. The insertion of thymidine analogs, including CldU, can significantly alter DNA processing and replication, so these analogs have also been used as mutagens, clastogens, and antiviral compounds.

Chemical Properties

White Needles

Uses

5-Chloro-2′-deoxyuridine (CldU) is used as a thymidine analog to study the miscoding potential of hypochlorous acid damage to DNA and DNA precursors. When used with antibody based immunofluorescent imaging, 5-Chloro-2′-deoxyuridine incorporation may be used in protocols to identify sites of DNA replication. CldU may be used as a labeling substrate in conjunction with other halogenated uridine labeling substrates such as iododeoxyuridine (IdU).

Uses

A halogenated uridine derivative used in pharmaceutical compositions.

Uses

5-Chloro-2'-deoxyuridine (CldU) is a thymidine analog that is readily incorporated, following phosphorylation, into newly synthesized DNA in place of thymidine. Like 5-bromo-2’-deoxyuridine and 5-iodo-2’-deoxyuridine, CldU can be detected immunologically in cells and tissues. CldU can also be added to cells or tissues sequentially with another thymidine analog to label temporally distinct populations. The insertion of thymidine analogs, including CldU, can significantly alter DNA processing and replication, so these analogs have also been used as mutagens, clastogens, and antiviral compounds.[Cayman Chemical]

Biochem/physiol Actions

DNA labeled with 5-chloro-2′-deoxyuridine (CldU) serves as an effective tool to analyze and quantify DNA replication, repair, and recombination. CldU is a potent mutagen, clastogen, and toxicant. It is used as a thymidine analog and is found to alter the dNTP pools and might lead to cell-cycle arrest. CldU produces sister-chromatid exchange but has less response to ionizing radiation compared to other thymine analogs. 5-Chloro-2′-deoxyuridine (CldU) is used to study the miscoding potential of hypochlorous acid damage to DNA and DNA precursors. When used with antibody based immunofluorescent imaging, 5-Chloro-2′-deoxyuridine incorporation may be used in protocols to identify sites of DNA replication. CldU may be used as a labeling substrate in conjunction with other halogenated uridine labeling substrates such as iododeoxyuridine (IdU).

References

[1] AMRITRAJ PATRA. Structure, stability and function of 5-chlorouracil modified A:U and G:U base pairs.[J]. Nucleic Acids Research, 2013: 2689-2697. DOI: 10.1093/nar/gks1316
[2] CLARA J. YUAN . Extended access methamphetamine decreases immature neurons in the hippocampus which results from loss and altered development of neural progenitors without altered dynamics of the S-phase of the cell cycle[J]. Pharmacology Biochemistry and Behavior, 2011, 100 1: Pages 98-108. DOI: 10.1016/j.pbb.2011.08.004
[3] SILJE ANDA  Beata G  Erik Boye. Cell-cycle analyses using thymidine analogues in fission yeast.[J]. PLoS ONE, 2014: e88629. DOI: 10.1371/journal.pone.0088629
[4] MARíA LLORENS-MARTíN  José L T  Gonzalo S Tejeda. Differential regulation of the variations induced by environmental richness in adult neurogenesis as a function of time: a dual birthdating analysis.[J]. PLoS ONE, 2010: e12188. DOI: 10.1371/journal.pone.0012188
[5] ALEX H TUTTLE. Immunofluorescent detection of two thymidine analogues (CldU and IdU) in primary tissue.[J]. Jove-Journal of Visualized Experiments, 2010, 46. DOI: 10.3791/2166
[6] L M FOX. Capacity of deoxycytidine to selectively antagonize cytotoxicity of 5-halogenated analogs of deoxycytidine without loss of antiherpetic activity.[J]. Antimicrobial Agents and Chemotherapy, 1982, 22 3: 431-441. DOI: 10.1128/aac.22.3.431

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View Lastest Price from 5-CHLORO-2'-DEOXYURIDINE manufacturers

Image Update time Product Price Min. Order Purity Supply Ability Manufacturer
5-Chloro-2'-deoxyuridine pictures 2026-04-20 5-Chloro-2'-deoxyuridine
50-90-8
US $30.00-40.00 / mg 99.54% 10g TargetMol Chemicals Inc.
5-CHLORO-2 2021-08-12 5-CHLORO-2"-DEOXYURIDINE
50-90-8
US $15.00-10.00 / KG 1KG 99%+ HPLC Monthly supply of 1 ton Zhuozhou Wenxi import and Export Co., Ltd

5-CHLORO-2'-DEOXYURIDINE Spectrum

2'-DEOXY-5-CHLOROURIDINE 5-CHLORODESOXYURIDINE 5-CHLORO-2'-DEOXYURIDINE 5-chloro-2’-deoxy-uridin 5-Chlorodeoxyuridin 5-Chloro-2'-deoxy-D-uridine 5-CHLORODEOXYURIDINE Chlorodeoxyuridine CldU CLUDR 5-chloro-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione 5-chloro-1-[(2R,4S,5R)-4-hydroxy-5-methylol-tetrahydrofuran-2-yl]pyrimidine-2,4-quinone 5-Chloro-2'-deoxyuridine ,98% 5-chloro-1-((2R,4S,5R)-4-hydroxy-5-(hydroxyMethyl)tetrahydrofuran-2-yl)pyriMidine-2,4(1H,3H)-dione Uridine,5-chloro-2'-deoxy- 5-CHLORO-1-[(2R,4S,5R)-4-HYDROXY-5-(HYDROXYMETHYL)OXOLAN-2-YL]-3H-PYRIMIDINE-2,4-DIONE NSC-371331, CDC 5-CHLORO-2'-DEOXYURIDINE USP/EP/BP 5-Chloro-2’-deoxy uridine NSC-371331, CDC,Radio-sensitizing agent for cancer treatment,anticancer agent Inhibitor,inhibit,5Chloro2'deoxyuridine,5 Chloro 2' deoxyuridine 5-Chloro-2’-deoxyuridine CldU (5-chloro-2''-deoxyuridine), Halogenated uridine derivative 5-Chloro-2''-deoxyuridine 5-Chloro-2''-deoxyuridine, 10 mM in DMSO 50-90-8 Biochemicals and Reagents BioChemical Nucleosides, Nucleotides, Oligonucleotides Nucleoside Analogs API intermediates Bases & Related Reagents Carbohydrates & Derivatives Heterocycles Nucleotides Biochemicals and Reagents Nucleoside Analogs Nucleosides, Nucleotides, Oligonucleotides